Ventral striatum
SRA SRA667466
SRS SRS3060066
SRR SRR6854053
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Full-length mRNA-seq No
Number of cells 7,663
Number of exp. genes 28,282 (median number of expressed genes per cell=1362)
Number of clusters 31
Tissue Ventral striatum
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) strain=CD-1|isolate=Ad13|age=p25|sex=female|tissue=StriatumVentral|cell_index=SI-3A-D8|BioSampleModel=Model organism or animal|;RNA-Seq of mouse StriatumVentral
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Astrocytes, Endothelial cells, Ependymal cells, Fibroblasts, Interneurons, Macrophages, Microglia, Neuroendocrine cells, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.