Hippocampus
| SRA | SRA675945 |
| SRS | SRS3100156 |
| SRR | SRR6908386 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina NovaSeq 6000 |
| Full-length mRNA-seq | No |
| Number of cells | 4,121 |
| Number of exp. genes | 29,570 (median number of expressed genes per cell=2599) |
| Number of clusters | 27 |
| Tissue | Hippocampus |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | No |
| Target cell population | |
| Metadata (raw) | source_name=Hippocampus_LPS|strain=C57BL/6|age=post natal day 14|treated with=10 mg/kg LPS (i.p. injection) for 2 hours|tissue=Hippocampus|;GSM3070099: LPS03; Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | Astrocytes, Cajal-Retzius cells, Endothelial cells, Erythroid-like and erythroid precursor cells, Fibroblasts, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Pericytes, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.