Neural stem cells from subventricular zone
| SRA | SRA681661 |
| SRS | SRS3124070 |
| SRR | SRR6940555 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina HiSeq 4000 |
| Read length (bp) | |
| Single or paired-end | PAIRED |
| Full-length mRNA-seq | No |
| Number of cells | 8,731 |
| Number of exp. genes | 30,874 (median number of expressed genes per cell=4409) |
| Number of clusters | 13 |
| Tissue | Neural stem cells from subventricular zone |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=Neural stem cells from subventricular zone|strain=C57BL/6|tissue=NSCs|mouse genotype=WT|infection=WT (ZIKV-Dak strain 41525)|time post infection=24h|;GSM3081853: WT 24h; Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Count matrix (raw read counts, R sparse data object, 88.7 Mb)
Cell clustering results |
| Putative cell types | Bergmann glia, Epithelial cells, Neuroendocrine cells, Radial glia cells, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.