Neural stem cells from subventricular zone
SRA SRA681661
SRS SRS3124072
SRR SRR6940557
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 4000
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 9,796
Number of exp. genes 30,627 (median number of expressed genes per cell=3910)
Number of clusters 14
Tissue Neural stem cells from subventricular zone
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Neural stem cells from subventricular zone|strain=C57BL/6|tissue=NSCs|mouse genotype=WT|infection=NS4B G18R (ZIKV-Dak strain 41525)|time post infection=24h|;GSM3081855: NS4B G18R 24h; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 89.2 Mb)
Cell clustering results
Putative cell types Astrocytes, Bergmann glia, Epithelial cells, Neural stem/precursor cells, Neuroendocrine cells, Radial glia cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.