SRA SRA688150
SRS SRS3161263
SRR SRR6988713
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 4000
Full-length mRNA-seq No
Number of cells 4,410
Number of exp. genes 23,416 (median number of expressed genes per cell=1806)
Number of clusters 14
Tissue Lung
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=Injured Type II Lung Epithelial Cells|strain=C57BL6|genotype=SftpcCreERT2;Rosa26-mTmG|cell type=Injured Type II Lung Epithelial Cells|;GSM3094786: Expt. 2 Injured Mouse (LPS), Type II Alveolar cells, technical rep. 1; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Pulmonary alveolar type II cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.