Cortical organoids
SRA SRA688526
SRS SRS3164179
SRR SRR6996082
Species Homo sapiens
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 2,329
Number of exp. genes 31,506 (median number of expressed genes per cell=2382)
Number of clusters 8
Tissue Cortical organoids
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=Cortical organoids|cell line=CVB - iPSC (Coriell GM25430)|passage=39|age of organoid=6 months|reprogramming strategy=Retroviral|;GSM3096388: WT-2; Homo sapiens; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 15.1 Mb)
Cell clustering results
Putative cell types Immature neurons, Neurons, Plasmacytoid dendritic cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.