Skeletal muscle macrophages from hindlimb
SRA SRA688834
SRS SRS3165514
SRR SRR6998057
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 1,679
Number of exp. genes 19,988 (median number of expressed genes per cell=1984)
Number of clusters 4
Tissue Skeletal muscle macrophages from hindlimb
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Hindlimb muscle|strain=C57BL/6|tissue=skeletal muscle|cell type=macrophage|cell markers=7AAD-CD45+CD64+MerTK+|ctx-injury day=4 days post-CTX|infection status=not infected|;GSM3097062: N_plus_CTX_rep2; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 8.0 Mb)
Cell clustering results
Putative cell types Macrophages list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.