Hypothalamus
SRA SRA694785
SRS SRS3214438
SRR SRR7059018
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 5,265
Number of exp. genes 32,452 (median number of expressed genes per cell=2317)
Number of clusters 26
Tissue Hypothalamus
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Preoptic region of the hypothalamus|tissue=brain|brain region=Preoptic region of the hypothalamus|Sex=female|;GSM3109253: scRNAseq of cells from the preoptic region of a pool of three female mice: Replicate 1; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Putative cell types Astrocytes, Endothelial cells, Fibroblasts, Macrophages, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Smooth muscle cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.