SRA SRA694785
SRS SRS3214441
SRR SRR7059023
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument NextSeq 500
Full-length mRNA-seq No
Number of cells 2,147
Number of exp. genes 26,711 (median number of expressed genes per cell=1741)
Number of clusters 17
Tissue Hypothalamus
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Preoptic region of the hypothalamus|tissue=brain|brain region=Preoptic region of the hypothalamus|Sex=male|;GSM3109258: scRNAseq of cells from the preoptic region of a pool of three male mice: Replicate 3; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Astrocytes, Endothelial cells, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Pericytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.