Alveolar rhabdomyosarcoma
SRA SRA695134
SRS SRS3218229
SRR SRR7063178
Species Homo sapiens
Sample (strain, genotype, etc.)
Tumor Yes
Protocol 10x chromium
Instrument Illumina HiSeq 4000
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 8,992
Number of exp. genes 33,629 (median number of expressed genes per cell=3693)
Number of clusters 13
Tissue Alveolar rhabdomyosarcoma
Cell line (Y/N) Yes
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=CD44_high|cell line=Rh41|cell type=human alveolar rhabdomyosarcoma cell line|cell subpopulation=CD44_high|batch=batch 3|
Gene search
Download Count matrix (raw read counts, R sparse data object, 71.5 Mb)
Cell clustering results
Putative cell types Basal cells, Multinuclear myocytes, Plasmacytoid dendritic cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.