Brain
SRA SRA700673
SRS SRS3270097
SRR SRR7132076
Species Homo sapiens
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 3,704
Number of exp. genes 33,145 (median number of expressed genes per cell=3473)
Number of clusters 11
Tissue Brain
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population pericytes
Metadata (raw) source_name=10X_ASCL1_SOX2_DORSO_d14.bam|donor id=Donor 4|tissue source=brain|cell type=pericytes or pericyte-derived induced neuronal cells|genotype/variation=Ascl1 and Sox2 transduced|;GSM3136660: 10X_ASCL1_SOX2_DORSO_d14; Homo sapiens; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 36.1 Mb)
Cell clustering results
Putative cell types Fibroblasts, Plasmacytoid dendritic cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.