Colon (Ulcerative Colitis)
| SRA | SRA703206 |
| SRS | SRS3296614 |
| SRR | SRR7159839 |
| Species | Homo sapiens |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina HiSeq 4000 |
| Full-length mRNA-seq | No |
| Number of cells | 4,651 |
| Number of exp. genes | 31,382 (median number of expressed genes per cell=1933) |
| Number of clusters | 21 |
| Tissue | Colon (Ulcerative Colitis) |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=Colon|tissue=Colon|disease state=Ulcerative Colitis|;GSM3140596: Human_UC_2; Homo sapiens; RNA-Seq |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | Cholangiocytes, Endothelial cells, Enteric glia cells, Fibroblasts, Pancreatic stellate cells, Plasma cells, Smooth muscle cells, T cells, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.