Embryonic fibroblasts
SRA SRA711739
SRS SRS3344662
SRR SRR7223818
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument HiSeq X Ten
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 6,177
Number of exp. genes 31,842 (median number of expressed genes per cell=3909)
Number of clusters 9
Tissue Embryonic fibroblasts
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=Intermediate cells on stage III day 21 during chemical reprogramming of MEFs|cell type=Intermediate cells|strain=C57BL/6J-Tg(GOFGFP)11Imeg/RbrcxICR|time=stage III day 21|;GSM3160744: scRNA-Seq_SIII D21; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 53.2 Mb)
Cell clustering results
Putative cell types Embryonic stem cell, Fibroblasts, Oval cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.