SRA SRA728025
SRS SRS3454424
SRR SRR7420403
Species Homo sapiens
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina NovaSeq 6000
Full-length mRNA-seq No
Number of cells 1,898
Number of exp. genes 28,569 (median number of expressed genes per cell=1504)
Number of clusters 14
Tissue Colon
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=UC_inflamed|subject status=Ulcerative colitis|tissue=inflamed area of colon|cell type=epithelial cells|;GSM3214204: B3_inflamed; Homo sapiens; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types B cells, Cholangiocytes, Dendritic cells, Epithelial cells, Goblet cells, Luminal epithelial cells, Serotonergic neurons, T cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.