SRA | SRA728025 |
SRS | SRS3454428 |
SRR | SRR7420407 |
Species | Homo sapiens |
Sample (strain, genotype, etc.) | |
Tumor | |
Protocol | 10x chromium |
Instrument | Illumina NovaSeq 6000 |
Full-length mRNA-seq | No |
Number of cells | 5,459 |
Number of exp. genes | 31,401 (median number of expressed genes per cell=848) |
Number of clusters | 17 |
Tissue | Colon |
Cell line (Y/N) | No |
Primary adult tissue (Y/N) | Yes |
Target cell population | |
Metadata (raw) | source_name=UC_non_inflamed|subject status=Ulcerative colitis|tissue=adjacent non-inflamed area|cell type=epithelial cells|;GSM3214208: C2_non_inflamed; Homo sapiens; RNA-Seq |
Gene search |
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Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
Putative cell types | Cholangiocytes, Dendritic cells, Epithelial cells, Goblet cells, NK cells, T cells list all |