Colon
SRA SRA728025
SRS SRS3454428
SRR SRR7420407
Species Homo sapiens
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina NovaSeq 6000
Full-length mRNA-seq No
Number of cells 5,459
Number of exp. genes 31,401 (median number of expressed genes per cell=848)
Number of clusters 17
Tissue Colon
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=UC_non_inflamed|subject status=Ulcerative colitis|tissue=adjacent non-inflamed area|cell type=epithelial cells|;GSM3214208: C2_non_inflamed; Homo sapiens; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Cholangiocytes, Dendritic cells, Epithelial cells, Goblet cells, NK cells, T cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.