SRA | SRA728071 |
SRS | SRS3458842 |
SRR | SRR7425023 |
Species | Mus musculus |
Sample (strain, genotype, etc.) | |
Tumor | |
Protocol | 10x chromium |
Instrument | Illumina HiSeq 4000 |
Full-length mRNA-seq | No |
Number of cells | 4,030 |
Number of exp. genes | 25,796 (median number of expressed genes per cell=2425) |
Number of clusters | 18 |
Tissue | Leukocytes from aortas |
Cell line (Y/N) | No |
Primary adult tissue (Y/N) | Yes |
Target cell population | |
Metadata (raw) | source_name=Leukocytes from aortas of Ldlr -/- mouse fed with western diet|strain=C57BL/6|mouse genotype=Ldlr -/-|tissue=Cd45+ cells|;GSM3215435: Total leukocytes from Ldlr -/- aorta (Single cell RNA-seq); Mus musculus; RNA-Seq |
Gene search |
|
Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
Putative cell types | Alveolar macrophages, Dendritic cells, Macrophages, Smooth muscle cells, T cells, Unknown list all |