Leukocytes from aortas
| SRA | SRA728071 |
| SRS | SRS3458842 |
| SRR | SRR7425023 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina HiSeq 4000 |
| Full-length mRNA-seq | No |
| Number of cells | 4,030 |
| Number of exp. genes | 25,796 (median number of expressed genes per cell=2425) |
| Number of clusters | 18 |
| Tissue | Leukocytes from aortas |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=Leukocytes from aortas of Ldlr -/- mouse fed with western diet|strain=C57BL/6|mouse genotype=Ldlr -/-|tissue=Cd45+ cells|;GSM3215435: Total leukocytes from Ldlr -/- aorta (Single cell RNA-seq); Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | Alveolar macrophages, Dendritic cells, Macrophages, Smooth muscle cells, T cells, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.