Foam cells from aortas
SRA SRA728071
SRS SRS3458845
SRR SRR7425024
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor
Protocol 10x chromium
Instrument Illumina HiSeq 4000
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 887
Number of exp. genes 25,138 (median number of expressed genes per cell=4269)
Number of clusters 5
Tissue Foam cells from aortas
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Foam cells from aortas of ApoE -/- mouse fed with western diet|strain=C57BL/6|mouse genotype=ApoE -/-|tissue=Foam cells|;GSM3215436: Total foam cells from ApoE -/- aorta (Single cell RNA-seq); Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 15.0 Mb)
Cell clustering results
Putative cell types Macrophages, Smooth muscle cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.