SRA SRA739096
SRS SRS3545818
SRR SRR7519472
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 4000
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 3,088
Number of exp. genes 21,114 (median number of expressed genes per cell=1689)
Number of clusters 4
Tissue Brain
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Brain|tissue=Brain|genotype=Zeb2fl/fl|number of cells=3097|;GSM3270885: Microglia_WT; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 11.6 Mb)
Cell clustering results
Putative cell types Microglia list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.