SRA SRA739096
SRS SRS3545821
SRR SRR7519475
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 4000
Full-length mRNA-seq No
Number of cells 5,129
Number of exp. genes 25,920 (median number of expressed genes per cell=2076)
Number of clusters 17
Tissue Colon
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Colon|tissue=Colon|genotype=Fcgr1-crexZeb2fl/fl|number of cells=4390|;GSM3270888: Zeb2KO Colon Mac; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types B cells, Endothelial cells, Epithelial cells, Fibroblasts, Macrophages, Smooth muscle cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.