SRA SRA739096
SRS SRS3545822
SRR SRR7519482
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 3,755
Number of exp. genes 21,910 (median number of expressed genes per cell=1474)
Number of clusters 8
Tissue Liver
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Liver|tissue=Liver|genotype=Nr1h3fl/fl|number of cells=3869|;GSM3270895: Kupffer Cell_WT_Nr1h3fl/fl; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 17.5 Mb)
Cell clustering results
Putative cell types B cells, Kupffer cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.