SRA SRA739096
SRS SRS3545824
SRR SRR7519483
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 1,432
Number of exp. genes 19,830 (median number of expressed genes per cell=1970)
Number of clusters 5
Tissue Liver
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Liver|tissue=Liver|genotype=Clec4f-crexNr1h3fl/fl|number of cells=1305|;GSM3270896: LXRaKO Kupffer Cell; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 8.3 Mb)
Cell clustering results
Putative cell types Kupffer cells, Red pulp macrophages list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.