Whole heart
SRA SRA745744
SRS SRS3600993
SRR SRR7611064
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument NextSeq 500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 7,810
Number of exp. genes 27,416 (median number of expressed genes per cell=1123)
Number of clusters 16
Tissue Whole heart
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=P0 whole heart|internal sample id=BL5|tissue=whole heart|developmental stage=P0|background strain=C57BL6+ICR|;GSM3308815: 10X_P0 whole heart, biological replicate 1, technical replicate 2; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 30.8 Mb)
Cell clustering results
Putative cell types Cardiomyocytes, Endothelial cells, Erythroid-like and erythroid precursor cells, Fibroblasts, Macrophages, Mesothelial cells, Pericytes, Smooth muscle cells, T memory cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.