CD45+ cells
SRA SRA765288
SRS SRS3731504
SRR SRR7775361
Species Mus musculus
Sample (strain, genotype, etc.)
Tumor Yes
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Read length (bp)
Single or paired-end PAIRED
Full-length mRNA-seq No
Number of cells 3,825
Number of exp. genes 22,670 (median number of expressed genes per cell=1225)
Number of clusters 10
Tissue CD45+ cells
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=CD45+ cells from tumor microenvironment of IgG2a isotype control antibody treated mice|strain=129S6|mouse genotype=wt|tissue=Cd45+ cells|;GSM3371684: CD45+ cells from tumor microenvironment of IgG2a isotype control antibody treated mice; Mus musculus; RNA-Seq
Gene search
Download Count matrix (raw read counts, R sparse data object, 12.7 Mb)
Cell clustering results
Putative cell types Dendritic cells, Macrophages, Neutrophils, T memory cells, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.