Bone marrow
SRA SRA815866
SRS SRS4088857
SRR SRR8258040
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 4000
Full-length mRNA-seq No
Number of cells 1,999
Number of exp. genes 23,610 (median number of expressed genes per cell=2183)
Number of clusters 11
Tissue Bone marrow
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=VEcad-cre;LoxP-tdTomato|treatment=5-FU|tissue=bone marrow|cell type=non-hematopoietic VEcad+|age=9w|;GSM3494770: vecad-5fu; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Endothelial cells, Osteoclasts, Plasma cells, Red pulp macrophages, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.