SRA SRA850127
SRS SRS4376744
SRR SRR8587770
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument NextSeq 500
Full-length mRNA-seq No
Number of cells 3,042
Number of exp. genes 26,882 (median number of expressed genes per cell=1158)
Number of clusters 18
Tissue Hypothalamus
Cell line (Y/N) No
Primary adult tissue (Y/N) No
Target cell population
Metadata (raw) source_name=Hypothalamus|strain=C57BL/6|age=8 weeks old|genotype=wild type|tissue=Hypothalamus|;GSM3611644: aCSF-treated; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Astrocytes, Endothelial cells, Ependymal cells, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Tanycytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.