Stria terminalis (brain)
SRA SRA850958
SRS SRS4386088
SRR SRR8599187
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina NovaSeq 6000
Full-length mRNA-seq No
Number of cells 6,495
Number of exp. genes 32,621 (median number of expressed genes per cell=1734)
Number of clusters 19
Tissue Stria terminalis (brain)
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Bed nucleus of the stria terminalis|strain=C57BL/6J|Sex=male|tissue=Bed nucleus of the stria terminalis|;GSM3615038: BNST_Male_8a; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Astrocytes, Cajal-Retzius cells, Endothelial cells, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Purkinje neurons list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.