Stria terminalis (brain)
SRA SRA850958
SRS SRS4386089
SRR SRR8599188
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina NovaSeq 6000
Full-length mRNA-seq No
Number of cells 6,411
Number of exp. genes 32,453 (median number of expressed genes per cell=1700)
Number of clusters 20
Tissue Stria terminalis (brain)
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Bed nucleus of the stria terminalis|strain=C57BL/6J|Sex=male|tissue=Bed nucleus of the stria terminalis|;GSM3615039: BNST_Male_8b; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Astrocytes, Cajal-Retzius cells, Endothelial cells, Interneurons, Microglia, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.