Substantia nigra
SRA SRA850958
SRS SRS4386091
SRR SRR8599190
Species Homo sapiens
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina NovaSeq 6000
Full-length mRNA-seq No
Number of cells 579
Number of exp. genes 22,971 (median number of expressed genes per cell=841)
Number of clusters 4
Tissue Substantia nigra
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Substantia nigra|individual=Subject MD5534|Sex=female|tissue=Substantia nigra|;GSM3615041: SN_SubjectMD5534_a; Homo sapiens; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Neurons, Oligodendrocytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.