Substantia nigra
SRA SRA850958
SRS SRS4386111
SRR SRR8599210
Species Homo sapiens
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina NovaSeq 6000
Full-length mRNA-seq No
Number of cells 2,590
Number of exp. genes 32,302 (median number of expressed genes per cell=1112)
Number of clusters 11
Tissue Substantia nigra
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Substantia nigra|individual=Subject MD6063|Sex=male|tissue=Substantia nigra|;GSM3615061: SN_SubjectMD6063_a; Homo sapiens; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Astrocytes, Endothelial cells, Neurons, Oligodendrocyte progenitor cells, Oligodendrocytes, Pericytes, Unknown list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.