SRA | SRA852206 |
SRS | SRS4405221 |
SRR | SRR8626423 |
Species | Mus musculus |
Sample (strain, genotype, etc.) | |
Tumor | |
Protocol | 10x chromium |
Instrument | NextSeq 500 |
Full-length mRNA-seq | No |
Number of cells | 3,979 |
Number of exp. genes | 26,272 (median number of expressed genes per cell=1603) |
Number of clusters | 19 |
Tissue | Sub-ventricular zone |
Cell line (Y/N) | No |
Primary adult tissue (Y/N) | Yes |
Target cell population | |
Metadata (raw) | strain=C57BL/6|age=3.4 months|sex=male|tissue=Sub-ventricular zone - All live cells(PI-) FACS sorted|cell_type=Sub-ventricular zone - All live cells(PI-) FACS sorted|collection_date=03-Aug-2018|genotype=WT C57Bl/6|BioSampleModel=Model organism or animal|;10X Single Cell RNA-sequencing of Young Mouse Sub-ventricular Zone |
Gene search |
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Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
Putative cell types | Astrocytes, Endothelial cells, Erythroid-like and erythroid precursor cells, Microglia, Neural stem/precursor cells, Oligodendrocyte progenitor cells, Oligodendrocytes, Pericytes, Unknown list all |