Visual cortex
| SRA | SRA856483 |
| SRS | SRS4457870 |
| SRR | SRR8689256 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina HiSeq 2500 |
| Full-length mRNA-seq | No |
| Number of cells | 5,793 |
| Number of exp. genes | 28,078 (median number of expressed genes per cell=2093) |
| Number of clusters | 18 |
| Tissue | Visual cortex |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=Acute cortical slices|tissue=brain|region=visual cortex|cell type=CGE-originating interneurons|developmental stage=juvenile (p21)|;GSM3637737: 5HT3A-GFP; Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | Astrocytes, Interneurons, Microglia, Neuroendocrine cells, Neurons, Oligodendrocytes, Unknown list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.