SRA | SRA862468 |
SRS | SRS4512241 |
SRR | SRR8755910 |
Species | Mus musculus |
Sample (strain, genotype, etc.) | |
Tumor | |
Protocol | 10x chromium |
Instrument | Illumina NovaSeq 6000 |
Full-length mRNA-seq | No |
Number of cells | 1,462 |
Number of exp. genes | 24,836 (median number of expressed genes per cell=1670) |
Number of clusters | 17 |
Tissue | Lung |
Cell line (Y/N) | No |
Primary adult tissue (Y/N) | Yes |
Target cell population | |
Metadata (raw) | strain=C57BL/6|age=6-8 weeks|sex=male|tissue=Lung|sample_type=Single cell RNA-Seq|humidity_condition=10% RH|cell_types=Whole lung|infection_state=infected|replicate=replicate 2|BioSampleModel=Model organism or animal|;Single cell RNA-seq 10% RH infected |
Gene search |
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Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
Putative cell types | Alveolar macrophages, B cells, Clara cells, Endothelial cells, Fibroblasts, Neutrophils, NK cells, Pulmonary alveolar type I cells, Pulmonary alveolar type II cells, T memory cells, Unknown list all |