SRA SRA866994
SRS SRS4545962
SRR SRR8795645,SRR8795646,SRR8795647,SRR8795648
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 4000
Full-length mRNA-seq No
Number of cells 3,965
Number of exp. genes 24,865 (median number of expressed genes per cell=1314)
Number of clusters 19
Tissue Brain
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=brain|genotype/variation=APP/PS1|tissue=whole brain|strain=APPPS1 B6-Tg(Thy1-APPswe; Thy1-PS1 L166P)|platform=10x Genomics|number of cells=3637|;GSM3687217: 9 months APP/PS1 whole brain; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types B cells, Macrophages, Microglia, Neutrophils, NK cells, Nuocytes, T cells, T memory cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.