Brain
| SRA | SRA866994 |
| SRS | SRS4545962 |
| SRR | SRR8795645,SRR8795646,SRR8795647,SRR8795648 |
| Species | Mus musculus |
| Sample (strain, genotype, etc.) | |
| Tumor | |
| Protocol | 10x chromium |
| Instrument | Illumina HiSeq 4000 |
| Full-length mRNA-seq | No |
| Number of cells | 3,965 |
| Number of exp. genes | 24,865 (median number of expressed genes per cell=1314) |
| Number of clusters | 19 |
| Tissue | Brain |
| Cell line (Y/N) | No |
| Primary adult tissue (Y/N) | Yes |
| Target cell population | |
| Metadata (raw) | source_name=brain|genotype/variation=APP/PS1|tissue=whole brain|strain=APPPS1 B6-Tg(Thy1-APPswe; Thy1-PS1 L166P)|platform=10x Genomics|number of cells=3637|;GSM3687217: 9 months APP/PS1 whole brain; Mus musculus; RNA-Seq |
| Gene search |
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| Download |
Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ] |
| Putative cell types | B cells, Macrophages, Microglia, Neutrophils, NK cells, Nuocytes, T cells, T memory cells list all |
2d projection view
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Gene not found. It could be because it has no detectable expression or the gene does not exist.