Distal small intestine
SRA SRA877776
SRS SRS4655564
SRR SRR8936495
Species Mus musculus
Sample (strain, genotype, etc.)
Protocol 10x chromium
Instrument Illumina HiSeq 2500
Full-length mRNA-seq No
Number of cells 9,930
Number of exp. genes 23,560 (median number of expressed genes per cell=1117)
Number of clusters 19
Tissue Distal small intestine
Cell line (Y/N) No
Primary adult tissue (Y/N) Yes
Target cell population
Metadata (raw) source_name=Small Intestine|strain/background=C57BL/6|tissue=Distal small intestine (ileum)|age=8-12 weeks|treatment=Small bowel resection|;GSM3732299: SBR2; Mus musculus; RNA-Seq
Gene search
Download Read counts: [ R data ] or [ Compressed plain text matrix ]
Clustering results: [ Plain text file ]
Putative cell types Enterocytes, Paneth cells list all
2d projection view
× Gene not found. It could be because it has no detectable expression or the gene does not exist.