Dataset of the day
Take a closer look at the cellular composition of Retina
, using a dataset which consists of 2901 cells. Clustering of this dataset resulted in 11 cell clusters, containing among others, Photoreceptor cells
Our manuscript entitled "PanglaoDB: A Web Server for Exploration of Mouse and Human Single Cell RNA Sequencing Data" has been accepted in the journal Database
Markers can be voted for now. In an experiment to try to extract crowd-enabled wisdom, we have introduced a voting function for markers. Markers can be upvoted or downvoted using small arrows
on the marker page
. Each visitor has one vote per marker-cell type. An anonymous hash is computed to store voting status. Arrows become visible when selecting a specific cell type from the list. Voting requires no registration (may change if we detect bots) and it is done anonymously.
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18-02-2019 Converting RData to plain text gzip files for faster download.
08-02-2019 Running updates. Some features will not work during the day and the server will be slow.
07-02-2019 Service was interrupted for a few hours due to upgrades.
02-01-2019 Our manuscript was submitted a few weeks ago and is now on review.
12-12-2018 Bug in the search fixed. A coding typo rendered the search broken. Thanks to the user that reported it.
19-11-2018 Differential expression analysis now takes input threshold arguments (q-value and log fold change).
16-11-2018 Differential expression analysis is now available. Enter the interactive view for a sample, then click the "Differential expression" link.